Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKD-SVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISE-VQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATK--------------------PLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDV---ASPFISWYG-DNLVISNNKDKPD-DELGNLYLQDIRDSATKNLIVA-----NIMQFAVHDNV-LLTIEKNSDE---KLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELM-DN-----------QPILSYETGDLVLYGYL-----FDKVIDTKTGKMYNLINTPTKSF |
| 3C5M Chain:A ((37-387)) | ----------------------------------------------YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN----ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSH-LMSNFDGSLMVGDGCDA------------NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39025 for 2063 contacts (-18.9/contact) +
2D Compatibility (PS) -29410 + (NN) 5376 + (LL) 5520
1D Compatibility (HY) 1600 + (ID) 1500
Total energy: -57439.0 ( -27.84 by residue)
QMean score : 0.249
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