Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLIEK-MAFSPRPERKGIFYTKEAPKEV-----RVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGF---------ANSKIFINVREKASLA----YYASSRIDSFKGYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRDANLDLENWIAKIKQATKEEVVAAINKIKPDTIYFLSKGGEELHGKNHI |
| 1HR9 Chain:B ((146-411)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------HLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKEN-TLPTTHIAIALEGVSWSAPDYFVALA-TQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTG-----------KRLSPEEVFEQVDKITKDDIIMWA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63543 for 1597 contacts (-39.8/contact) +
2D Compatibility (PS) -26248 + (NN) -13163 + (LL) 13016
1D Compatibility (HY) -12800 + (ID) 3000
Total energy: -105738.0 ( -66.21 by residue)
QMean score : 0.443
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