Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQKLEAMK---QTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
2IOY Chain:A ((114-194))
------EFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQAADFDRSKGLSVMENILQAQPKIDAVFAQNDEM------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24325 for 521 contacts (46.7/contact) +
2D Compatibility (PS) -7981 + (NN) 325 + (LL) 3400
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 17069.0 ( 32.76 by residue)
QMean score : 0.096
(partial model without unconserved sides chains):
PDB file :
Tito_2IOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IOY-query.scw
PDB file :
Tito_Scwrl_2IOY.pdb
: