Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNLQTKFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDLLQTIERNN----TQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLE-AATVLTQTGELKKLKRSELKAAYR---FSTIAEKNYIVLDATFSLALEEKNLIQ----AKMDELTAA-----------REAK--QPLEYPSCGSVFKRP-----------------PGH---------FAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVKIIGEDK |
| 1MBB Chain:A ((42-330)) | -------------------------------------------------------PVLILGEGSNVLFLED-YRGTVI-INRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120113 for 1784 contacts (-67.3/contact) +
2D Compatibility (PS) -24287 + (NN) 6418 + (LL) 4128
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -151404.0 ( -84.87 by residue)
QMean score : 0.550
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