Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERNFRLACTHEHHHHHFICMKCGKTKEIMMCPMDFLTEALP---GYQIDGHKFEVYGECPECLQAS
4RB1 Chain:A ((9-133))
---------QRLIDKGLKVTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILERHDF-GDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLELYG---------
General information:
TITO was launched using:
RESULT:
Template:
4RB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46382 for 776 contacts (-59.8/contact) +
2D Compatibility (PS) -13014 + (NN) 883 + (LL) 1448
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -64765.0 ( -83.46 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4RB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RB1-query.scw
PDB file :
Tito_Scwrl_4RB1.pdb
: