Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIEVNNVS--YHYDKE--HALENIHFQVAKGSFTGLIGPNGSGKSTMLKLILGVLKKQQGSISLFGEKQADFKD-------WVKIGFVSQKSNAF-------NSAFPATVKEVVA-SGLTKKKGLFKTLNNKDKEDIDYALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPELLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHVISINKRIIFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV |
| 3TIF Chain:A ((1-217)) | ---MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEE-----------RFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI--------NVARFGERIIY------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83071 for 1518 contacts (-54.7/contact) +
2D Compatibility (PS) -21029 + (NN) -9042 + (LL) 4932
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -126260.0 ( -83.18 by residue)
QMean score : 0.477
|
|
|