Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQV---IGRTIILYKTSVNKQQIKLP
3K2T Chain:A ((3-49))
---------------------------------------------VRTKQ---KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDG-------
General information:
TITO was launched using:
RESULT:
Template:
3K2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1144 for 186 contacts (-6.2/contact) +
2D Compatibility (PS) -4595 + (NN) -2558 + (LL) 4828
1D Compatibility (HY) 400 + (ID) 250
Total energy: -3319.0 ( -17.84 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_3K2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K2T-query.scw
PDB file :
Tito_Scwrl_3K2T.pdb
: