Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
2CY0 Chain:A ((3-262)) | --RFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKA-GGIPLKGPALVLGAGGAGRAVAFALR-EAGLEVWVWNRTPQRALALAEEFG-LRAVPLEKAREA----RLLVNATRVGLE-DPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARRALG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96924 for 2369 contacts (-40.9/contact) +
2D Compatibility (PS) -28025 + (NN) -11815 + (LL) 552
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -159562.0 ( -67.35 by residue)
QMean score : 0.507
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