Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVLYFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE
1PQS Chain:A ((813-842))
---------------------------------------------------------ITKIKYQD-EDG---DFVVLGSDEDWNVAKEMLA---------
General information:
TITO was launched using:
RESULT:
Template:
1PQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2829 for 134 contacts (21.1/contact) +
2D Compatibility (PS) -3047 + (NN) 1672 + (LL) 4288
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 3242.0 ( 24.19 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_1PQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PQS-query.scw
PDB file :
Tito_Scwrl_1PQS.pdb
: