Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGT--------HIITSQIEHHAVLKTCEYL-ETQGFEVTYLPVDE-HGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRD----------QQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLA--YQM-HGGEQERKRRAGTENLAGICGFSAASSIM-----TNERELKN-EEYISFKKRMAEIWRSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
3A9X Chain:A ((19-428)) | ---KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLE-ERLEAEFGKRIHLNSRFPGVE--RLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGA-------------------PVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156753 for 3076 contacts (-51.0/contact) +
2D Compatibility (PS) -38263 + (NN) -14866 + (LL) 1948
1D Compatibility (HY) -24000 + (ID) 6750
Total energy: -238684.0 ( -77.60 by residue)
QMean score : 0.499
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