Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQ--TLNFYKI--EEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYE-FLKYYDIPVIVIATKADKIPRSKWQKNAKIVRETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME |
| 3R9X Chain:A ((13-138)) | --------------------------AIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHS---MVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAK------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42003 for 823 contacts (-51.0/contact) +
2D Compatibility (PS) -12881 + (NN) -756 + (LL) 4984
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -61106.0 ( -74.25 by residue)
QMean score : 0.531
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