Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSS-----VDIATLHSFSAQAETLATFYPHLKDLAVSPLEKINPTE--IIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEF---REK-KETTFIANPGCYATATLLGLAPLATNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNS-HQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2NQT Chain:A ((11-352)) | -KVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEAAVLGGHDAVFLALPHGHSAVLAQQLSPETL-IIDCGADFRLTDAAVWERFYGSS-----HAGSWPYGLPELPGARDQLRGTRRIAVPG-YPTAALLALFPALAADLIEP-AVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQ--LRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187711 for 2935 contacts (-64.0/contact) +
2D Compatibility (PS) -35529 + (NN) -11669 + (LL) 896
1D Compatibility (HY) -18000 + (ID) 6250
Total energy: -258263.0 ( -87.99 by residue)
QMean score : 0.464
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