Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFNAIKSEGKSVFM-FSADWCGDCKFIEPVMPEIE--AENEDFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAAI
2J23 Chain:A ((2-93))
VQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGAD--------------
General information:
TITO was launched using:
RESULT:
Template:
2J23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48644 for 602 contacts (-80.8/contact) +
2D Compatibility (PS) -9493 + (NN) -2808 + (LL) 1336
1D Compatibility (HY) -10800 + (ID) 1450
Total energy: -71859.0 ( -119.37 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2J23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J23-query.scw
PDB file :
Tito_Scwrl_2J23.pdb
: