Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGTTTIGIDLGTANILVYSKEKGIILNEPSVVALNTNDGTVLAIGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVSGVRKPNVVVCTPTGATSVERRAISDAVRSTGARSVVLIEEPVAAAIGADLPVAEPVANVIV-DIGGGTSEIAII-----SYGGVVSSTSIRTGGDHMDEEIIQYIRKNYNLLIG-------------QTTAERIKMELGYAPIEHVTQ---TADIRGRDLLTGLPK--TIQVSSTEIQSALAETLQRILEAIRNTLELCPPELSGDIVDRGIILSGGGSLLQGFRDWLVEEIDVPVHMAPSPLESVAIGTGRSLVFADKLAKN |
| 1DKG Chain:D ((139-374)) | --------------------------------------------------------------------------------------------------VITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATG-------PKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVS-DIDD--VILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107339 for 1552 contacts (-69.2/contact) +
2D Compatibility (PS) -22562 + (NN) -11077 + (LL) 7388
1D Compatibility (HY) -4800 + (ID) 3200
Total energy: -141590.0 ( -91.23 by residue)
QMean score : 0.539
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