Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRNLRGKAARIKEIR
4UY8 Chain:P ((1-111))
-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKE--
General information:
TITO was launched using:
RESULT:
Template:
4UY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34567 for 701 contacts (-49.3/contact) +
2D Compatibility (PS) -11696 + (NN) -4570 + (LL) 512
1D Compatibility (HY) -10000 + (ID) 3150
Total energy: -63471.0 ( -90.54 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_4UY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UY8-query.scw
PDB file :
Tito_Scwrl_4UY8.pdb
: