Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILSIFPDMFSGVTGNSIIKKAIENERVAVEVTDFREYAEGKHHIVDDYPYGGGAGMLLKAQPIFDAVQAVKEKQPETKPRVILMDPAGKRFNQKMAEEFAEEEHLVFICGHYEGYDERIREHLVTDEVSIGDYILTGGEIGAMIVMDSVIRLLPGVLGNKDSAVTDSFSTGLLEHPHYTRPADFRGMKVPDILLSGNHAWIEEWRDKESLKRTYERRPDLLKNYPLTDKQKTWLKEWSDSK
1UAK Chain:A ((21-259))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGA-KVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKE-----
General information:
TITO was launched using:
RESULT:
Template:
1UAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148544 for 1680 contacts (-88.4/contact) +
2D Compatibility (PS) -25096 + (NN) -9892 + (LL) -32
1D Compatibility (HY) -24000 + (ID) 5250
Total energy: -212814.0 ( -126.67 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1UAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAK-query.scw
PDB file :
Tito_Scwrl_1UAK.pdb
: