Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKAIRTLVYAVGSKNDKKIRLEIIE
1K0R Chain:A ((306-340))
----------------------------ARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRI-------------
General information:
TITO was launched using:
RESULT:
Template:
1K0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11067 for 165 contacts (-67.1/contact) +
2D Compatibility (PS) -3839 + (NN) -264 + (LL) 3328
1D Compatibility (HY) 1200 + (ID) 350
Total energy: -10992.0 ( -66.62 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1K0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K0R-query.scw
PDB file :
Tito_Scwrl_1K0R.pdb
: