Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEAKNSADAFLELA-------------IPWVNKERPPYLG----ELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQSTKYTLTRVRDFLKRKEELM |
2IA4 Chain:A ((15-108)) | ---------------KNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIF----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11500 for 475 contacts (24.2/contact) +
2D Compatibility (PS) -8003 + (NN) -350 + (LL) 4168
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: 1515.0 ( 3.19 by residue)
QMean score : 0.086
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