Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
| 2YNT Chain:C ((121-152)) | -------------------------------------------------------------------------------------DEFTLGNGLIELYY--PGAGHTEDNIVAWLPKSK--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4290 for 141 contacts (-30.4/contact) +
2D Compatibility (PS) -3962 + (NN) -3916 + (LL) 12956
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -2362.0 ( -16.75 by residue)
QMean score : 0.519
|
|
|