Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFY-MVDQGVLVWGSVVLILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVLVLWFVYDKTIKNKHLTLEFPHDE
1Q59 Chain:A ((1-172))
MAYS---TREILLALCIRDSR--VHGNGTLHPVLELAARETPLRLSPEDTVVLRYHVLLEEIIERNSETFTETWNRFITHTEHVDLDFNSVFLEIFHRGDPSLGRALAWMAWCMHACRTLCCNQSTPYYVVDLSVRGMLEASE--------------GLDGWIHQQGG---WST-----LIEDNIPGDDDDLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1Q59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168460 for 1205 contacts (-139.8/contact) +
2D Compatibility (PS) -17278 + (NN) -5276 + (LL) 2868
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -192946.0 ( -160.12 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1Q59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q59-query.scw
PDB file :
Tito_Scwrl_1Q59.pdb
: