Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQKKVAILGAGSWGTGLALV-------LADNNHKPVIWGNLD-----KIVNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTILVHVSKGIEPETN-LRM-SEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNP---QTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVLEKM---GMVVEGVRTAKAVHG--WAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIEKESF |
| 1WPQ Chain:A ((2-342)) | -ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANPTGISLIKGVDEGPNGLKLISEVIGERLGIP----MSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVGEFIHCL------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200794 for 2807 contacts (-71.5/contact) +
2D Compatibility (PS) -33979 + (NN) -8187 + (LL) 1764
1D Compatibility (HY) -19200 + (ID) 5300
Total energy: -265696.0 ( -94.65 by residue)
QMean score : 0.484
|
|
|