Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRF--EPGEVQQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
1KDR Chain:A ((8-223))------ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEG-EDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQK---


General information:
TITO was launched using:
RESULT:

Template: 1KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120934 for 1747 contacts (-69.2/contact) +
2D Compatibility (PS) -22839 + (NN) -7588 + (LL) 664
1D Compatibility (HY) -12800 + (ID) 4650
Total energy: -168147.0 ( -96.25 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_1KDR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KDR-query.scw
PDB file : Tito_Scwrl_1KDR.pdb: