Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFV-ENGVDKLIVARETYENLVQNDLSL |
| 2YXX Chain:A ((6-383)) | -------------------------KVAEIHGTPTYVYFEETLRKRSRLVKEVFE--GVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWREL---NPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLED------LDSFMERFRSMNIRGLHVHIGSQITRVEPFVEA----FSKVVRASERYGFEE--INIGGGWGINYSGEE--LDLSSYREKVVPDLKR--------FKRVIVEIGRYIVAPSGYLLLRVVLVKRRHN-KAFVVVDGGMNVLIRPALYSAYHRIFVLGKQGK--EMRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVRENGRISLIRRRETEMDIFKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250992 for 3211 contacts (-78.2/contact) +
2D Compatibility (PS) -40176 + (NN) -12638 + (LL) 4588
1D Compatibility (HY) -30000 + (ID) 6700
Total energy: -335918.0 ( -104.61 by residue)
QMean score : 0.541
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