Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDLVNTKMNALPQDMMKILHMDSMADLT----NIDAYFAYVFQYIFIAACVYAALIGAQALIKEETDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFLASVALVLFLKPSGVDGGNLVMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDKVDFFKYFSPINYAIPSEIMDKGITGTNA-----LISCGVIVVMVAMTFVLYKKKDLKV |
| 1FX8 Chain:A ((6-259)) | ----TLKGQCIAEFLGTGLLIFFGVGCVAALKVA-----GASFGQWEISVIWGLGVAMAIYLTAGVS--GAHLNPAVTIALWLFAC-FDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGS----------VESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTD----DGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192126 for 2095 contacts (-91.7/contact) +
2D Compatibility (PS) -25074 + (NN) -3772 + (LL) 2932
1D Compatibility (HY) 1600 + (ID) 1300
Total energy: -217740.0 ( -103.93 by residue)
QMean score : 0.188
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