Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFTGNPRASEVVGVDSEGALEAYGLVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNR-DFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
| 3S2U Chain:A ((3-355)) | GNVLIMAGGTGGHVFPALACAREFQARG--YAVHWLGTPRGIENDLVPKAGLPLHLIQ--------------APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLAPIARRVCEAFPD--TFPA---RLTTGNPVRGELFLDAHA-RA--PLTG-RRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYR--TVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVP-----DDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201904 for 3002 contacts (-67.3/contact) +
2D Compatibility (PS) -35853 + (NN) -15701 + (LL) 1796
1D Compatibility (HY) -16400 + (ID) 5300
Total energy: -273362.0 ( -91.06 by residue)
QMean score : 0.601
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