Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKMHEKKSGTPTMGAVVFITAMLISFLVFSFISGEVSAATWLLFIALALFGALGFLDD-YIKVVQKRNLGLTSKQK--------FLGQVVISILFYLVYHFNDFAETLNIPFTNIEVDLG-WFFVIFILFWLVG-FSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIF-CFAIV-GGMLGFLLFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFKATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLVGAIISVCVVIF |
| 3SPE Chain:A ((7-286)) | ----ANPSRLIVAIEIVEDEIPL------TKVDGLKARIILIEDNTSEVGTQR----------VLPGTLVSDKDGSQSLVYPLFEAPVSFFGKLGDSNGMRVWSTTTADIEEFDEAAMAKFKTRQFRIQLIEKPESPVIVKTADQQDYLNITFDK-GVYSDMYNADLYVGDVLVDSYSD--------DGVVSGLSPL-YSPFSQFYVYHENIDLVRQMIYDTEMRVNPAAAAHTTAPGEIDFLTFLAVD-GDPYQGIQVLGPLD---------------------------GGITLGKDGNIYAS---GGTDG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187258 for 1803 contacts (-103.9/contact) +
2D Compatibility (PS) -25562 + (NN) 2271 + (LL) 10084
1D Compatibility (HY) -1200 + (ID) 2550
Total energy: -204215.0 ( -113.26 by residue)
QMean score : 0.090
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