Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPD------GEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGP-FSEEVKTVAELHQFMETE-GLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
| 3GK6 Chain:A ((19-170)) | ------------------FQGMNISEINGFEVTGFVVRTTNADEMNPMTAKIGNLWEKFYLNA-APKLTDKS-------------KVYGLYTNYE---SDFTGAFDVIACSDTLSP-------------------QLLSESVKTKVSSGKYVTFSATGEMPQVVIDLWNEVWNYFA--CPHKRAY---TTDFEYYKSA--------NTVEISIAVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30734 for 1007 contacts (-30.5/contact) +
2D Compatibility (PS) -14444 + (NN) 427 + (LL) 4636
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -43265.0 ( -42.96 by residue)
QMean score : 0.391
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