Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVM-DAGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETEEYDFMIPSGQVVKITISVGVSSSKDGANTSEGL---FKSADEALYKAKLTGRNQVCIADGN |
| 3TVK Chain:A ((4-163)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSR----AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79631 for 1198 contacts (-66.5/contact) +
2D Compatibility (PS) -17627 + (NN) -12637 + (LL) 19024
1D Compatibility (HY) -10000 + (ID) 2950
Total energy: -103821.0 ( -86.66 by residue)
QMean score : 0.505
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