Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLTN-YEVEIFAVYET----TTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTC-DTEKDYEKGRMVIQGKLVTK |
| 3PSQ Chain:A ((25-205)) | --------------------------------------------------------------QFDDLLAINSDVMAWLTVKGTHIDYPIVQGENNLEYINKSVEGEYSLSGSVFLDYRNKVTFEDKYSLIYAHHMAGNVMFGELPNFRKKSFFNKHKEFSIETKTKQKLKINIFACIQTDAFDSLLFNPIDVDISSKNEF---LNHIKQKSVQYREILTTNESRFVALSTCEDMTTD---GRIIVIGQI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62240 for 1364 contacts (-45.6/contact) +
2D Compatibility (PS) -18732 + (NN) -4476 + (LL) 5112
1D Compatibility (HY) -17200 + (ID) 3100
Total energy: -100636.0 ( -73.78 by residue)
QMean score : 0.444
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