Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPK----IVATTVAITEIMDKLDLPLVGIPSSSKK------LPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEA-------------DLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQ---------KVEYLASNTEYLQSANPD-IILRAAHGMPAEVVKMFDEEFKT---NDIWKHFDAVKNNRVYDLDENLFGMTASL-NAPEALKEMEKMLYDN |
3EIX Chain:A ((11-287)) | -------------------------KDENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKS-FDG-DYKQNINSFKTIAKALNKEKE-GEK--RLAEHDKL---INKYKDEIKFDRNQKVLPAVVAKAGL----LAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHA------KKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKEL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37428 for 1890 contacts (-19.8/contact) +
2D Compatibility (PS) -25337 + (NN) -7400 + (LL) 3932
1D Compatibility (HY) -10800 + (ID) 4050
Total energy: -81083.0 ( -42.90 by residue)
QMean score : 0.416
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