Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3OXK Chain:A ((7-107))
-DSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECP-EGYRVVNNIGEDAGQTVKHIHFHIL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58608 for 688 contacts (-85.2/contact) +
2D Compatibility (PS) -10811 + (NN) -4443 + (LL) 2892
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -81420.0 ( -118.34 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3OXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXK-query.scw
PDB file :
Tito_Scwrl_3OXK.pdb
: