Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILV------ADENKAKEVEQ---KLKDGEK-FADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
| 1M5Y Chain:A ((284-388)) | ----------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL-NKGQMSAPVHSSFGWHLIEL--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21979 for 618 contacts (-35.6/contact) +
2D Compatibility (PS) -10135 + (NN) -10953 + (LL) 12012
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -38855.0 ( -62.87 by residue)
QMean score : 0.720
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