Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIALPQKWASYQEVCDNIALSVKNLEHVLIEA
1LJL Chain:A ((2-129))
-DKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKE--HWGFDDP-----AGKEWSEFQRVRDEIKLAIEKFK------
General information:
TITO was launched using:
RESULT:
Template:
1LJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63231 for 1033 contacts (-61.2/contact) +
2D Compatibility (PS) -14013 + (NN) -8991 + (LL) 2156
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -95479.0 ( -92.43 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1LJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LJL-query.scw
PDB file :
Tito_Scwrl_1LJL.pdb
: