Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGTE--------VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLE-------------------KIPEEQIIVALGELCDRA---EELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELRE--------ESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR |
| 3CNY Chain:A ((4-300)) | ----SKAEKDIKWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVGGFFP--------GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASE--AFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYG-LKVAYHHHMGTGIQTKEETDRLMANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRVVHVHFKDVRRSKEEECRAKGLTFQGSFLNGMFTVPGDGDLDFKPVYDKLIAN-NYKGWIVVEAEQDPSK-ANPLEMAQIAHRYIKQHLIE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88309 for 2224 contacts (-39.7/contact) +
2D Compatibility (PS) -28500 + (NN) -14051 + (LL) 1712
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -131498.0 ( -59.13 by residue)
QMean score : 0.468
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