Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASSAVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWPVAG--KYRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLLVAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLA---KGILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
1MZR Chain:A ((33-292)) | ------------GN-VMPQLGLGVWQASNEEVIT-AIQKALEVGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDD--HKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQK-VIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPD---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128834 for 2177 contacts (-59.2/contact) +
2D Compatibility (PS) -27512 + (NN) -11950 + (LL) 2552
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -196944.0 ( -90.47 by residue)
QMean score : 0.492
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