Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDGSVVIEISLDDKKADKQLDAFEKDLAKAGTNAGAALDKAYREAVSDIASQSKRLKDTFVNAFKSMGNAGSNALKASLNFIRELPSNVQAALSKLASTVKTGFVNAAKASITAVKNLGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKISINVIKSIPGAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPGAAKTAATAVKNSFVVAYKAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSALKTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGMREALKNSVEKPAEQARFSILRLAAAFGLIAATKNVVGSAIGRVDTIDTATKSLTVLTGSAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVGNGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSEGSLESTRAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLANIVENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLAKVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVANTIKGSFVKLVGTLGSTTAAFGVVVAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVSALKPVGSGFKGILKYIGVRAWVVLGFALAAVVDVIQVLARIVLVAIKALQGLYYAIKAAFQVLQGDLKGAKKSLEQSKDAFVDAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKTAKKTETSGKKIKDTLKLVESTAKQTETTVSKSNQAIDTMLSGGVDQYGNKLSEKTKSFLNSAKELYSQYQESAKKSQDAYTAAMEKAQSLEGDKRKKAIADANKTLVDETTKNNSTLLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLEQGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQIDEQTKKNQTLSTNLKNWASEMNSIIANGGTLNAQTFANGLSQLGNISDEQLSALWQNFVSTSTSIDNTLAGLAGIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVLSTISSLPNGMFLNGESGKNQFLTAIKSGDFQGAGKYLVDGVKMGTDSIDSEMKTKGQTGGQNFADGVKGKEGAAKSAGSAVKNKAKEGATDPNAFKAVGSKDSAGFNNGVMGGKGGAYSAGSSVGNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGRAAASLANKALAAVQKKQDSHSPSKESKKLGGDFGTGYSLGIADKNKAVTKAANNLVASALGTESQIKKLSSTLKDKISSAIDAGLHSKNKSSGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMADLTKQSKEYAASITEKMQSYGSISNVDPENPKSIQAEMQKRLKEIKAFQANVEKLRKKGVSKDIINDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKAMGNTAANAMYSAGINAAKGLINGLNSQKKQLEKAAKSIANTITNSVKKALKIHSPSRVAIELGKFFTGGLGNGV----LAGAKGAVQSTNKMVDKVVNAASNMTVPTINLPKISAEKALGLKSVDLNRTITVKTIIDNKTKESSNADLIKAIQQSGDRPIIFNVDGKDIADNTNNHLGSSTSLAFYGKGL |
3C3L Chain:A ((862-963)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGDFLTQKELNDIQASLNNLA-PMIETGSQTFYIAGSENA--------------EVANQVLATNLDDRMRVPMSIYAPAQAGVAGIPFMTIGTGDGMMMQTLSTMKGAPKNTLKIFD------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10232 for 488 contacts (21.0/contact) +
2D Compatibility (PS) -9698 + (NN) 3056 + (LL) 109512
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: 107202.0 ( 219.68 by residue)
QMean score : 0.007
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