Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEK------VVGDVLSNAKVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY
3VVE Chain:A ((38-256))------------------------------------IRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERL-GLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGV---IVSRKGGPRTAKDLQGKVV---GVQVGTTYMEAAQKIPGIKEVRTY--QRDPDALQDLLAGRIDTWITDRFVA-----KEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGED------


General information:
TITO was launched using:
RESULT:

Template: 3VVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80324 for 1776 contacts (-45.2/contact) +
2D Compatibility (PS) -23028 + (NN) -6478 + (LL) 3876
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -123154.0 ( -69.34 by residue)
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_3VVE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VVE-query.scw
PDB file : Tito_Scwrl_3VVE.pdb: