Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMNLVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN
1PD7 Chain:B ((11-21))
------------------------------------------------------------------------------AADYLERRERE------
General information:
TITO was launched using:
RESULT:
Template:
1PD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1214 for 36 contacts (33.7/contact) +
2D Compatibility (PS) -1075 + (NN) -214 + (LL) 8056
1D Compatibility (HY) 400 + (ID) 100
Total energy: 8281.0 ( 230.03 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_1PD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PD7-query.scw
PDB file :
Tito_Scwrl_1PD7.pdb
: