Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK
3SOK Chain:A ((10-31))
------VAIIGILAAFAIPAYNDYIARS----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6475 for 81 contacts (-79.9/contact) +
2D Compatibility (PS) -2315 + (NN) -1190 + (LL) 3664
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -7716.0 ( -95.26 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_3SOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SOK-query.scw
PDB file :
Tito_Scwrl_3SOK.pdb
: