Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFG-FDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
3QJR Chain:A ((31-58))
-------------------------------------------------------------------------------LVLGFLALIVGSLFGPFQALNYGNVDAY---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5741 for 106 contacts (-54.2/contact) +
2D Compatibility (PS) -2627 + (NN) -614 + (LL) 11100
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -3832.0 ( -36.15 by residue)
QMean score : -0.224
(partial model without unconserved sides chains):
PDB file :
Tito_3QJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJR-query.scw
PDB file :
Tito_Scwrl_3QJR.pdb
: