Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAV-MGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDN--QANTICDKMATKTNTKHRVLYVPEQL---GEEAYRSLLKEPAIQEGLRLVQSANAIILGIG---DALAMAKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVHKVPT----FGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK |
| 4L4Y Chain:A ((18-265)) | -------------------------------------------------------------------------------------------EGCLEYETQLRRQFSLQHVRVIPGLA--DVGGRLGIG---AAHMLMSLLQPQQMLAIGFGEATMNTLQRL--SGFISSQQIRLVTLSGGVGSYMTGIGQLNAACS-----------VNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVS--------GYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINA-LVTDQDTAAAILR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98864 for 1864 contacts (-53.0/contact) +
2D Compatibility (PS) -24589 + (NN) -15702 + (LL) 10748
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -148207.0 ( -79.51 by residue)
QMean score : 0.478
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