Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN
3TQM Chain:A ((7-91))
-------GQGVDISPALRELTEKKLHRIQPCRDEI--SNIHIIFHINKLKKI-VDANVKLPGSTINAQAESDDMYKTVDLLMHKLETQLSKYKAK--------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40518 for 571 contacts (-71.0/contact) +
2D Compatibility (PS) -9500 + (NN) -2665 + (LL) 5092
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -55641.0 ( -97.44 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_3TQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQM-query.scw
PDB file :
Tito_Scwrl_3TQM.pdb
: