Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQH-REMLDQVL--EIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDA----LKTTVQKDYHHPILENLGDNRLILMTAHRRENL--GEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHFEETDRPEDFIV |
| 4NES Chain:A ((2-358)) | ----KLSIILGTRPEIIKLSPIIRALEKT--NIDWHIIHTNQHYSENMDKIFFEELNLPNPKYNLNI--GSGTHGEQTGKMLIEIEKVLLKEKPDVVVVQGDTNTVLAGALVASKLKIDVAHVEAGLRSFDRNMP--EEINRVLTDHISSYLFAPTEIAKNNLLREGIEENKIFVVGNTIVDATLQNLKIAEKNENVRAFFNSVV-DDYFLLTLHRAENVDNKERLKNIVEGIFEIIEIY-DKAIIFSIHPRTKKRLKEFNLFDKLKSNKKIKIIEPVGYLEFLMLEKNAELILTDSGGVQEEACILKVPCITLRDNTERPETVEVGANILVGDNKEKLIK-AVEIMLNKKRNWK-----NPFGNGKSGERIV------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125917 for 3033 contacts (-41.5/contact) +
2D Compatibility (PS) -37184 + (NN) -15607 + (LL) 3112
1D Compatibility (HY) -28400 + (ID) 6750
Total energy: -210746.0 ( -69.48 by residue)
QMean score : 0.431
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