Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTIHWNINKQQSNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFVASYPAKAIQLMEKFWPGPLTVILPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIILRPGGVTKEQIEQIIGPVDISTNNTKETEKPKAPGMKYTHYAPKAPVYLIEGSTQFWQSEINKAEAANKKLGILATKELINQLNTSGTIETTGSIKALDEIATSLYKGLRAFDHADVDIIFAEVYPETELGAAIMNRLEKAAGNRRITE |
3VTI Chain:A ((208-348)) | --------------------VAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRRRKKRYG-KPFAVMMRDVEEVKKYCIVSPEEERLLLSQRRP---IVLLKKKGEKLAKGIADDLDTLGVMLPYAPIHYLLMEEIDFPIVMTSGNVSEEPICKDNEEALEKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67054 for 1055 contacts (-63.6/contact) +
2D Compatibility (PS) -15802 + (NN) -9134 + (LL) 13000
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -90090.0 ( -85.39 by residue)
QMean score : 0.382
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