Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAWSSAGSLGFKGSRKSTPFAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIKDVTPVPHNGCRPPKRRRV
4JYA Chain:K ((1-116))------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-


General information:
TITO was launched using:
RESULT:

Template: 4JYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -28250 for 871 contacts (-32.4/contact) +
2D Compatibility (PS) -13212 + (NN) -11830 + (LL) 1288
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -63404.0 ( -72.79 by residue)
QMean score : 0.673

(partial model without unconserved sides chains):
PDB file : Tito_4JYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JYA-query.scw
PDB file : Tito_Scwrl_4JYA.pdb: