Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQIIDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYHGRVKALAEAARENGLEF
3DLL Chain:L ((26-111))
---------------------------RLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALKSGN---KTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGG---
General information:
TITO was launched using:
RESULT:
Template:
3DLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8655 for 655 contacts (-13.2/contact) +
2D Compatibility (PS) -9471 + (NN) -3921 + (LL) 2588
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -26109.0 ( -39.86 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_3DLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLL-query.scw
PDB file :
Tito_Scwrl_3DLL.pdb
: