Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSED....VTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS |
3D24 Chain:B ((16-20)) | ----------------------------------------------------------------------------------------------------------------------------------------------------YLTTN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 0 for 7 contacts (0.0/contact) +
2D Compatibility (PS) -476 + (NN) -85 + (LL) 27904
1D Compatibility (HY) -800 + (ID) 100
Total energy: 26443.0 ( 3777.57 by residue)
QMean score : 0.444
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