Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCPIYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPLNVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIKSVTSMLSFQKALAEFNEKLNAQANELKASVKERAKEFEEGLLKKQENVDMKIAEIEAKRKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK |
4H24 Chain:A ((175-238)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------IISMVRALDEVMNKLQ-RANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKARGEQSDDLLTQM----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16658 for 304 contacts (54.8/contact) +
2D Compatibility (PS) -7009 + (NN) -4234 + (LL) 19052
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 19917.0 ( 65.52 by residue)
QMean score : 0.406
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