Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQEITSIVDGPISGEV---VSLEADEMIAEGRVIAKIHPN-------MVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDD-----------IG--DDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3HJZ Chain:A ((87-259))
-------------------------------------------KEILKIISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKIAATWEGIKAAEILEKEGIKCNLTLLFNFCQAVTCANANITLISPFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGFKTEVMGASFRNLDEIKEL--AGCDLLTIAPKFLEELKRE-------------------
General information:
TITO was launched using:
RESULT:
Template:
3HJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100751 for 1153 contacts (-87.4/contact) +
2D Compatibility (PS) -16363 + (NN) -3406 + (LL) 4280
1D Compatibility (HY) -14000 + (ID) 2750
Total energy: -132990.0 ( -115.34 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3HJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJZ-query.scw
PDB file :
Tito_Scwrl_3HJZ.pdb
: