Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIAAFDIGGTALKMGVVLPHGEIILT-KSAEISGSDG--DQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAF----RPGKYTLNETTTMLV-LRRQYAELTGR-----------PLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEENRHE |
| 3VGL Chain:A ((7-269)) | -----VDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAV-AGASEGHDVEAVGIGAAGYVDDKRATVLFAPNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145596 for 1981 contacts (-73.5/contact) +
2D Compatibility (PS) -26433 + (NN) -17141 + (LL) 4336
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -199834.0 ( -100.88 by residue)
QMean score : 0.411
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